Insertion junction: CLIP2.029788_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029788
Chromosome:chromosome 3
Location:4909906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGTGAGGAGCTGAGAGTTCCGGGGGGCCAAGCGGCCCGGGATGTGG
Internal bar code:TTATGCATTTGCTTGTGAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAGGAGTGCACCATCAC
Suggested primer 2:ATGAAGATCGTGTGCCTGCA