Insertion junction: CLIP2.029790_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029790
Chromosome:chromosome 17
Location:1769069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708850 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS
Cre17.g708901 (1 of 20) PF01822 - WSC domain (WSC) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCTGCGAGCAGGTGCGGGCGCACGCGTCGAAGGCGATGGCGCGCGG
Internal bar code:TCTGTGACGCTCTGGTCCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGCTTCGTTGAACACTG
Suggested primer 2:AGTGTGAACATGGCCCTAGC