Insertion junction: CLIP2.029792_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029792
Chromosome:chromosome 10
Location:4902907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453728 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCCCCACAGTCTCCGCCGCCAGTACTTGCCCTACCCTATCCACTGAC
Internal bar code:GGGTACTTCCACCATAAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4104
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTGTCTGGTGTGTTGT
Suggested primer 2:CGTTCCCATAATGCACGCTG