Insertion junction: CLIP2.029804_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029804
Chromosome:chromosome 10
Location:2415729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435200 (1 of 4) IPR000533 - Tropomyosin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACATCTCACTGGGACATGTGCCTTTGCCCCCCTGAACGCGGGGAGC
Internal bar code:CTAGGATTGCGCAAAGGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3627
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTACGTGGCGTCCTTGTA
Suggested primer 2:TAGCCAAGGAGCTGAAGCAC