Insertion junction: CLIP2.029821_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029821
Chromosome:chromosome 2
Location:4820291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109100 PDE23 (1 of 17) 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGGACACCAGCGCTGCGAACATCATGCCGGACAGCGCCACCGCCAC
Internal bar code:AGATGTTTGGTGATGGTTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3066
LEAP-Seq percent confirming:87.2727
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTGAGGGCATTCTTGG
Suggested primer 2:CCGAGCTGGACAACACTCTT