Insertion junction: CLIP2.029828_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029828
Chromosome:chromosome 9
Location:1161541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00140371

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGAGACACACCACATCCCACACAGGTGTCGCAAGCCCCGCAGGCGG
Internal bar code:TCACGCTTCAAACAAGAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:1.5625
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCAGTTGGTGTGGGTG
Suggested primer 2:CGATGTGACAAGCGCGTTAG