Insertion junction: CLIP2.029834_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029834
Chromosome:chromosome 8
Location:2597303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCAGGGTCGGCAGCGCCATCCGGCGAGCTATGTGGGCCTGATACTG
Internal bar code:ATGGATAGATCTCGCTCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2394
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGAGTACGACCATCGC
Suggested primer 2:CTACCTGTGGCCGTTGAAGT