Insertion junction: CLIP2.029848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029848
Chromosome:chromosome 11
Location:594499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00185915

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGTACACCTCGAAAGACCACACTTCATAACCTCGGAAGGCTGAGCAT
Internal bar code:CTGATTATTACGCAGTTCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTAATGCACCACCACCA
Suggested primer 2:TCAGATGTGTGTGTGTCGGG