Insertion junction: CLIP2.029858_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029858
Chromosome:chromosome 2
Location:6358232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387850 RWP13 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCCAATAGCAGCCTTCCAAAACCGGTGCCGTCTGACTTCGCGAGTG
Internal bar code:GCGACGTGACTTGTGCGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCCCATGCCGTGTTG
Suggested primer 2:AGCGTGTGTGCATCTGTACA