Insertion junction: CLIP2.029864_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029864
Chromosome:chromosome 8
Location:3557495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379350 TPT10,TPT phosphate/phosphoenolpyruvate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATCGCCTTCAAAGCGCCGAGACATGTGCCGACTTCTCAGCCGCGCC
Internal bar code:GTAAGACTAGAGTAGGACCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2393
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGGGGAATAAGCTCTCC
Suggested primer 2:TGAGTTGTGATGTGGGTCGG