Insertion junction: CLIP2.029868_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029868
Chromosome:chromosome 13
Location:1125871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569450 (1 of 1) IPR000104//IPR029058 - Antifreeze protein, type I // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCCCGCCCTCCAGTAGGCCAAGATGGCCCTCGGACTCATCAAACA
Internal bar code:TAGTTGTCTTCGTCTAGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGAAATGGACGCTGGA
Suggested primer 2:CGCGGTAAGGTTGGGAAGAT