Insertion junction: CLIP2.029881_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029881
Chromosome:chromosome 8
Location:4159761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCCAACCGCGTAAGTGGGGGCTAGCCCGCTGGCATGCCTGCTGTGG
Internal bar code:TCTATAAGGGCTTCATTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2383
LEAP-Seq percent confirming:45.6522
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAAGTACGAACCTCGGA
Suggested primer 2:ATTGGGTCCTGCTTAGGCAC