Insertion junction: CLIP2.029881_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029881
Chromosome:chromosome 8
Location:4159766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGCACGCCACCTGAACAGCCAGGTCTGGACCACACGTGGACGACGT
Internal bar code:TCTATAAGGGCTTCATTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGTCCTGCTTAGGCAC
Suggested primer 2:GCCAAAGTACGAACCTCGGA