Insertion junction: CLIP2.029882_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029882
Chromosome:chromosome 6
Location:2551246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800642 (1 of 1) PF05066//PF10537//PF15613//PF15614 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGGAGGTACGTGCGTTTTGCACTGCCTGCTGTCGCCGGCATGCTACT
Internal bar code:CGTGTACCTACCAGATAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCCTGTGTTTTGAGTG
Suggested primer 2:GGGTATGGGGTTGTCAGGTG