Insertion junction: CLIP2.029883_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029883
Chromosome:chromosome 5
Location:2726106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240500 (1 of 1) PTHR24375:SF140 - ZINC FINGER WITH UFM1-SPECIFIC PEPTIDASE DOMAIN PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGCATGCCACCCAGCAGTTAACCAGCGAAAGGTGGGTAACTGACAT
Internal bar code:AGGCGGATCGCAATCGGACCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGATCCAGTGTCCGTTCG
Suggested primer 2:GACAGGACGCGGTAGATGAG