Insertion junction: CLIP2.029885_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029885
Chromosome:chromosome 7
Location:1922373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325748 (1 of 1) 3.5.2.9 - 5-oxoprolinase (ATP-hydrolyzing) / Pyroglutamase (ATP-hydrolyzing) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTTGGACAGGTCCAGTCCCGCCCAGCGCGTGGTGAGTGCGTACCC
Internal bar code:CAAATATCAATCGTCGTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGATGCCCATGGTGAAG
Suggested primer 2:GCGGTGGTTGTCTCAAACAC