Insertion junction: CLIP2.029892_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029892
Chromosome:chromosome 6
Location:5061598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTCGAGACCTCTCGCGCAGGGCCGCGTTAGCGGGTGCATTTCTTCCT
Internal bar code:CCTCCGATCCACGACGGTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGCATGTGTGTACG
Suggested primer 2:CGTGGCTCTTCCCTGGAAAT