Insertion junction: CLIP2.029893_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029893
Chromosome:chromosome 8
Location:3040030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375200 (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGAGTATTCGCGCCAATTCCTATCAGAAGTACTAAGAGGATGTAATTA
Internal bar code:TCGACTCGCATACGTAACAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGGCTACAACGACCAG
Suggested primer 2:CATGAGAAGGGGGTGGCAAT