Insertion junction: CLIP2.029895_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029895
Chromosome:chromosome 5
Location:1420837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00213942

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGCACCTCCCCTGGGTGGCAGGCTTACTTCAGACTGCCACCCCAA
Internal bar code:GGGTTTTGGTCAGTGTCCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGACCAAATACGCGCGAG
Suggested primer 2:TGGAGATGGATGCAGAGGGA