Insertion junction: CLIP2.029901_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029901
Chromosome:chromosome 17
Location:3585469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725100 (1 of 1) PTHR11390:SF20 - DNA TOPOISOMERASE 3-BETA-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGTGCTCGGCTAGGACCTGGAAGTCCTCATTGACCATTGGAACGCGA
Internal bar code:ACTGAGGCATATGGGTCCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCCGTTCACACAGCACC
Suggested primer 2:GTACGGACTGCGCTCTCTAC