Insertion junction: CLIP2.029913_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.029913
Chromosome:chromosome 1
Location:836114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004600 RWP12 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGACTTGATACAACATACTAGTCACCGCGTGTGACACAGGGGATGCAG
Internal bar code:ATACCATACCCCATCAAGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGCCAGCTGTAAAGG
Suggested primer 2:GGAGAACAGGTTGCGGAGAA