Insertion junction: CLIP2.029913_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.029913
Chromosome:chromosome 6
Location:7061210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297650 UBC36 (1 of 1) K10582 - ubiquitin-conjugating enzyme E2 Q (UBE2Q); E2 ubiquitin conjugating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGGTGCGTATGAAACCAGGTGAGCGCAAGTGCGCTTGCGGGCAGGCG
Internal bar code:AAAAAAACAGTTATAGCCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1638
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAAGCTCGTGGAACTG
Suggested primer 2:CGTGTAGTCGAGGTTGCAGT