Insertion junction: CLIP2.029916_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029916
Chromosome:chromosome 16
Location:6861217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671700 (1 of 4) PTHR11920//PTHR11920:SF248 - ADENYLATE AND GUANYLATE CYCLASES // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGCTGCTGGGCGGCCTGCCGCCGGTGGTGGAGGACCGCGGCGCCG
Internal bar code:AGCGCGCAGTTAGCAATGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2248
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGAGGAGCATAACGAGC
Suggested primer 2:CATGCGCAACTTCTCCAACC