Insertion junction: CLIP2.029918_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029918
Chromosome:chromosome 17
Location:6360252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g743647 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCGGAGGGTGAGCAAGGGGCACGGGTGATGGCGCTGTGGCGGCGGT
Internal bar code:TCTGCAGGGTAGGGTAGTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGTGCTCCTCTTCCC
Suggested primer 2:GCCCTATCGATCGTGCAGAA