Insertion junction: CLIP2.029925_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.029925
Chromosome:chromosome 3
Location:5789405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187700 HEL19 (1 of 1) PTHR24031//PTHR24031:SF252 - RNA HELICASE // SUBFAMILY NOT NAMED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCCGCACCACCACACTGGCATATACGGTATGTCACTGCCACATCTTT
Internal bar code:ACACGGCGCTTGAAAAGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAAGGAGCGGAAATGG
Suggested primer 2:AAGCAGTACGAGCCGTGTAC