Insertion junction: CLIP2.029929_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029929
Chromosome:chromosome 9
Location:4091249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399178 CSN5 (1 of 1) K09613 - COP9 signalosome complex subunit 5 [EC:3.4.-.-] (COPS5, CSN5); COP signalosome subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCTCGCCCGCTGCGGGCAACAGGCCCCGGACTGGCAGCTCTACCAG
Internal bar code:TGTTTAGACATTTGATGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1194
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATTCATACGCCTCCGCC
Suggested primer 2:CCCTCCACTTTGCTGGCATA