Insertion junction: CLIP2.029935_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029935
Chromosome:chromosome 1
Location:2353476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013250 (1 of 2) IPR006357//IPR023214 - HAD-superfamily hydrolase, subfamily IIA // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGTGCACAGGCCAGTTGCGCCGCTGCCCAGCCACTGGCGCAATTGC
Internal bar code:TCAAATGTGGTGACCCGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2640
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTCAAATGTGCAGC
Suggested primer 2:CGCTAAACGCCTTGAGATGC