Insertion junction: CLIP2.029936_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.029936
Chromosome:chromosome 14
Location:1728763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619050 (1 of 1) PTHR31465:SF1 - PROTEIN RTA1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATAACCGCACGTCCGCACACGCCCCCCCTTCCATGCACACCACCCA
Internal bar code:AGAGCTTTTCCTGAGCTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGCTGCTCATCATCAC
Suggested primer 2:CAAAGCCTGTGCACAGCAAT