Insertion junction: CLIP2.029951_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.029951
Chromosome:chromosome 16
Location:6188491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676850 (1 of 14) IPR003593//IPR003959//IPR027417 - AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACTCTCTCACGTGCCCATGGCTCTCAGCGCCCTCCTAAGCCGACAA
Internal bar code:AATTATTTATTCGTACTTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:962
LEAP-Seq percent confirming:43.5897
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGCCAACCCGTTTTGAC
Suggested primer 2:CCCACCGATCTCATTCGAGG