Insertion junction: CLIP2.029951_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.029951
Chromosome:chromosome 16
Location:6188498
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676850 (1 of 14) IPR003593//IPR003959//IPR027417 - AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCATGGGCATGTGAGGTGACATGGGGCATGGGTGAGGAAACATGGGCA
Internal bar code:AATTATTTATTCGTACTTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCGATCTCATTCGAGG
Suggested primer 2:GAGTGCCAACCCGTTTTGAC