Insertion junction: CLIP2.029953_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029953
Chromosome:chromosome 9
Location:3035304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393691 KDG4 (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase; Diacylglycerol/ceramide/sphingosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCGCCGCGCCCCAACCCCGCGAAAAGCGGACTGTGCTCCCACACTG
Internal bar code:CGAAGGGCTAAGTGGTTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTCATCTTCCCGCTGT
Suggested primer 2:CGGCCGATATCCACCGTAAA