Insertion junction: CLIP2.029969_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.029969
Chromosome:chromosome 8
Location:1841953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367200 VPS52 (1 of 1) PF04129 - Vps52 / Sac2 family (Vps52); Subunit of GARP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCCCCAATACTACCACTGGGCACAAAGCGCTGGGAGAAGAGGGAGA
Internal bar code:TTGGCTGTCTCTGGTAGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1174
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTTGCCTTCCACTTACG
Suggested primer 2:GTCATACGCCGCTCTACCTC