Insertion junction: CLIP2.029973_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029973
Chromosome:chromosome 13
Location:871195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567450 HON1 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTCGGCCTTCTTGGGGGCAGCCGCCTTCTTGGGCGCGGCCTTCTTCT
Internal bar code:AGTCTAGTTGATCATGTGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3990
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGGCCATCAAGACTTT
Suggested primer 2:CTTGATAGCGGGCAGAGGAG