Insertion junction: CLIP2.029976_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.029976
Chromosome:chromosome 1
Location:1412177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007500 NSS1 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGCCAGCAGAGTGAGTGGGGCTTGGAGTGGCCTTGGCCCTCGCAGG
Internal bar code:GTCGAATCAAATCGGCTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGATGTAGCTGTGTGC
Suggested primer 2:CAATATCCGCTGGGTCTCCC