Insertion junction: CLIP2.030001_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030001
Chromosome:chromosome 12
Location:3908088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801398 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGGTTAGTTGGACTTTGTCGATTGCAGCCGTAGCTCTTTTACGAGG
Internal bar code:TGAGGTGTAGTCGATAACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1437
LEAP-Seq percent confirming:55.814
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGTACCAGGAGAGGA
Suggested primer 2:ATAGCTAGGCACGTGCAGTC