Insertion junction: CLIP2.030006_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030006
Chromosome:chromosome 12
Location:5526636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530450 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGGTTTCGCTTGCACGCGGGGCCTGGCTGCTGACGCGGCAGTGAAC
Internal bar code:TTTTGCCTAATGCCATTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCACCGCCATCTACCTC
Suggested primer 2:TGATACTGGTGCAGGGCAAG