Insertion junction: CLIP2.030020_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030020
Chromosome:chromosome 12
Location:2274737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508450 (1 of 1) IPR001680//IPR002893//IPR017986 - WD40 repeat // Zinc finger, MYND-type // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCCGGCAGAAGTCTTGCCTCGAGTAGGAGGAGACCTAAGCAGGGCCT
Internal bar code:GAGACAGGCAGATTTTATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1203
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGGTTGTTGGGATAGAA
Suggested primer 2:ACTGACAGCTGCTGAAGTCC