Insertion junction: CLIP2.030023_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030023
Chromosome:chromosome 10
Location:4843318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453400 MSC4,MSCL1 (1 of 1) PF00924//PF13202 - Mechanosensitive ion channel (MS_channel) // EF hand (EF-hand_5); Predicted protein with mechanosensitive ion channel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTGCTCGAAGAACAGGAACAACACCGACTCGAACGCGTTCCTGTTT
Internal bar code:GGGGGGCTAGATCTCCATTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:6.12245
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTTTGCGCTTTGCCTT
Suggested primer 2:CCAAGCAAGACCAAAGGTGC