Insertion junction: CLIP2.030023_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030023
Chromosome:chromosome 10
Location:4843318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453400 MSC4,MSCL1 (1 of 1) PF00924//PF13202 - Mechanosensitive ion channel (MS_channel) // EF hand (EF-hand_5); Predicted protein with mechanosensitive ion channel domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGTGGGTGACATGGTGTACTTTAATGGCGACTCGGCGCGAGTGAAG
Internal bar code:GGGGGGCTAGATCTCCATTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1602
LEAP-Seq percent confirming:72.4138
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCAAGACCAAAGGTGC
Suggested primer 2:CTGTCTTTGCGCTTTGCCTT