Insertion junction: CLIP2.030025_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.030025
Chromosome:chromosome 6
Location:3491185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278111 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTATAGGTGGCGCAGGATCTTGGCGCGCAGCTCGAAGGGCAGCCGCG
Internal bar code:GGTCACTCAACTCGGGCTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGATGTGGAGCTGCC
Suggested primer 2:ACAACACCCACAACCACCAT