Insertion junction: CLIP2.030028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030028
Chromosome:chromosome 10
Location:3357070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443550 (1 of 1) 2.7.11.11//2.7.11.12 - cAMP-dependent protein kinase / Protein kinase A // cGMP-dependent protein kinase / PKG II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCGGGCACACCGAGGTGCGGGAGATCGGGGCGGGGCTTTGCGCAC
Internal bar code:ACTGTCTATCATTAGGGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2610
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCGTAACTGTGTCGGC
Suggested primer 2:AGAGCTTCAAGGACAACCGG