Insertion junction: CLIP2.030046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030046
Chromosome:chromosome 11
Location:3288385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476400 MAG1 DNA-3-methyladenine glycosylase II; (1 of 1) 3.2.2.21 - DNA-3-methyladenine glycosylase II / DNA-3-methyladenine glycosidase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTATAGGGAGAGGGTCATGAATACACACATATAAAAACGCTTGTT
Internal bar code:TTCGGTACTATGGTTATTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCTCTGGCTGCTCTCA
Suggested primer 2:CAAGGCAAGGCATGATCAGC