Insertion junction: CLIP2.030049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.030049
Chromosome:chromosome 3
Location:8605095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210625 (1 of 1) PTHR10799//PTHR10799:SF721 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGATGGGCTCCTTGCCGGGCGCCTGACGCGTATACACGAACACCTG
Internal bar code:GCATATCGAGCTTCGCATCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGCACCATGATCAGTT
Suggested primer 2:CAGACTATCTCGTTGGGCCC