Insertion junction: CLIP2.030052_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.030052
Chromosome:chromosome 13
Location:4000989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590400 (1 of 1) PF00041//PF04969 - Fibronectin type III domain (fn3) // CS domain (CS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAGGGTGGCACGCCAGTGCTCTTGGCAGCGGACCCCACCTCGCTCC
Internal bar code:TCTCTGCAGTAGTTCTGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCAGCCAATCAAGAGC
Suggested primer 2:GCGTCAGCTTCAAGGTAGGT