Insertion junction: CLIP2.030053_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.030053
Chromosome:chromosome 9
Location:3614200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00135978

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGGGTGCGGCGACCGCTTCAAGAACTCAAGAACTCGACGCTATCCAC
Internal bar code:TAGCCCTAACGGCGCGAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3744
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTGAAGTGCCTGTGCCA
Suggested primer 2:GTCTAGAATCCGGGCTCACG