Insertion junction: CLIP2.030059_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030059
Chromosome:chromosome 8
Location:3423374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378250 SMM32 (1 of 1) 2.1.1.85 - Protein-histidine N-methyltransferase / Protein methylase IV; S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCCACGCGCGTGTGGAAGGCGAGCGCAACCCATCCACGCAAATCAC
Internal bar code:TACGAAGTGCTTACTGAACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1661
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTAGTGCACAACCCGAC
Suggested primer 2:GTGACATGCATGCGTCGTAC