Insertion junction: CLIP2.030066_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.030066
Chromosome:chromosome 1
Location:4406983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030000 (1 of 1) PTHR12242:SF1 - PROTEIN ROLLING STONE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATACCTGACCGTGCCTGGGCCGCGCCCTCCGCAGGTGGGGCTGGTGGG
Internal bar code:GGGATGGGTCTCGGGCACTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCCACAGGAACACGCAG
Suggested primer 2:CATAGCTCTACGGCCACAGG