Insertion junction: CLIP2.030071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.030071
Chromosome:chromosome 11
Location:313249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467567 UBQ1 Ubiquitin; (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGTAATTCCTGCAGCAGCGCTGCCAAGGCAGCGATGGCAGGTTATGA
Internal bar code:TACTGGGTGATTGTCGGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1763
LEAP-Seq percent confirming:80.2817
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAGCCGTTTCTGTCACA
Suggested primer 2:ACGTCGTTCAAGCGTAACCT