Insertion junction: CLIP2.030079_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.030079
Chromosome:chromosome 14
Location:1868024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGTGGAGGCAGGCGGGTAGGCGGGGCGGGGCAGGCGCAAAGTAGTA
Internal bar code:TATGGTTCAGGTTATCAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:199
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGGAGGTTTCGGGTCAG
Suggested primer 2:ACATTGTGGTGTTCTTGCGC