Insertion junction: CLIP2.030089_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.030089
Chromosome:chromosome 12
Location:9331943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGCACTTGCGCGCGTGCACGCAAGGGACGCACACGTGCTTGTTTGGA
Internal bar code:TCCGTTGGGACACATGTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGAATGCAAGGGAGGGG
Suggested primer 2:CCTGCGACTTGTTGGAGAGT